St. Lawrence University
Friday, April 23, 2004
2:00 – 6:00 pm
St. Lawrence University Student Center
The Festival of Science Student Symposium
The Student Symposium during the annual Festival of Science (FOS) is a successful,
valued, and growing opportunity for SLU undergraduates to share the results of
their research with the campus community. Together with the annual FOS Romer
Lecture, the Student Symposium has become an effective showcase of some of the
exciting progress in the sciences. The opportunity to formally present creative work
is an invaluable culminating experience for students who have collaborated with
faculty on original research projects. Not only do such students educate faculty and
fellow students about their original work, these students also apply and hone their
communication skills and gain exposure to the format of professional research
conferences. Since its inception in 1996, the FOS has become institutionalized to the
point where it is now a central focal point of most student research projects in the
sciences.
Co-Chairs
Jeffery Greathouse, Chemistry Dept.
Artur Poczwardowski, Psychology Dept.
Committee Members
Karin Bodensteiner, Biology Dept.
Wil Rivers, Biology Dept.
Stephen Robinson, Geology Dept.
Michael Shuckers, Mathematics, Computer Science and Statistics Dept.
The planning committee would like to thank Margaret Kent Bass, Associate Dean for
Faculty Affairs, for providing financial support for this event.
Festival of Science logo by Ellen Galo
Schedule of Events
Session 1: Oral Presentations…………………2:00 – 2:45 P.M.
Refreshments Break …………………………..2:45 – 3:00 P.M.
Session 2: Oral Presentations…………………3:00 – 3:45 P.M.
Session 3: Poster Presentations ………………3:45 – 5:45 P.M.
ABSTRACTS
ORAL PRESENTATIONS
Dr. Aileen O’Donoghue, presiding
2:00-2:15 Towards a more family-friendly St. Lawrence: A comparative analysis of
policies and practices of St. Lawrence University, Colgate University and
Hobart and William Smith Colleges
Emily Hunt
Advisor: Dr. Patrice LeClerc
The research presented in this paper examines the family environment for faculty
and administrative staff at St. Lawrence University (SLU), located in Canton, NY.
Interviews were conducted with faculty and administrative staff at SLU as part of the
SLU Summer Fellows Program. Interviews were conducted with senior level
administrators to obtain factual regarding the policies and practices of the university as
well as the policy creation process. Interviews were conducted with representatives of
Colgate University and Hobart and William Smith Colleges to obtain information
regarding policies and practices of the two institutions and provide the basis for a
comparative analysis. The most prominent finding resulting from the individual
interviews at SLU is that the university is doing many things to be family-friendly but
more can always be done. Based on this finding, the administrative interviews were
pursued in order to answer questions about development and implementation and clarify
any misconceptions and unclear policies. In the comparative analysis, there are some
aspects at which SLU is better and others where SLU could use improvement. The
recommendations to the administration and policy making bodies of SLU appear in the
final chapter. The recommendations seek to create a friendlier environment for families
at SLU. Examples of the recommendations include extending parental and maternity
leave policies to all employee classes; continuing support of Canton Day Care Center;
create a pamphlet for distribution to faculty and staff about childcare options; examine
different course schedules that create more flexibility for meetings; continue to support
families within the academic setting.
2:15-2:30 Investigations into home-range size and selective winter-feeding in North
American Porcupines (Erethizon dorsatum)
William (Liam) S. Kean
Advisor: Dr. Erika Barthelmess
This series of studies focused on a population of North American Porcupines
(Erethizon dorsatum), which inhabit the St. Lawrence University Kip Tract. The first set
of studies used radio-telemetry equipment to try and quantify home-range size for five
radio-collared porcupines between the months of October 2003 and February 2004. I
collected data with homing procedures, and then I used GIS data analysis techniques to
calculate home-range sizes. Due to the relatively high population density of porcupines
on the Kip Tract, I predicted that home-range sizes would be smaller than published
values of home-range sizes for other porcupines in other environments.The second set of
experiments investigated whether porcupines show selective feeding on sugar maple trees
(Acer saccharum). Initial observations on the Kip Tract seemed to suggest that
porcupines showed feeding preference for specific sugar maple trees over other sugar
maple trees within the same geographic area. I conducted a paired experiment in which I
compared aspects of plant chemistry between feeding and non-feeding trees, pairing each
feeding tree with a non-feeding tree. Then I used a series of chemical analyses on the tree
bark from these feeding and non-feeding trees to compare the samples and investigate
reasons for selectivity. Among some of the tests performed on the tree bark samples, I
tested for water content and pH.
2:30-2:45 Predicting positive perceptions of coaching behaviors from athlete
individual difference variables
Barat Wolfe
Advisor: Dr. Artur Poczwardowski
An athlete’s perceptions of coaching behaviors are fundamental in how they
respond to communicative situations and relationships, in turn affecting the coach-athlete
dyad, team dynamics, individual performance, and team performance (Cox, 2002). This
study examined a total of 22 variables (e.g., self-confidence, anxiety, coach-athlete
compatibility, fear of failure, satisfaction, cohesion, demographics, and win-loss record)
that were hypothesized to influence an athlete’s perceptions of coaching behaviors.
Twenty-four female, Division I hockey players participated in the study. Testing took
place three times during the season: emotionally neutral (a game early in the season),
positive (a winning streak), and negative (losing a big game). Multiple linear regressions
for the three sampled times yielded optimal models for predicting positive perceptions of
coaching behaviors. For the neutral time, the model included three variables: task
compatibility (r=-.766, p<.05), self-confidence (r=-.245, p<.05), and satisfaction with
playing time (r=-.345, p<.05) and accounted for 78.4% of the total variance in the
criterion scores (R2=.784; p<.05). For the positive time, the model (R2=.839; p<.05)
included personal compatibility (r=-.728, p<.05), individual attraction to group as a
measure of task cohesion (r=-.561, p<.05), and self-confidence (r=-.351, p<.05). For the
negative time, the model (R2=.943; p<.05) included athlete satisfaction (r=-.796, p<.05),
personal compatibility (r=-.757, p<.05), cognitive anxiety (r=0.229, p<.05), and group
integration as a measure of task cohesion (r=-.513, p<.05). The results suggest that
athletes who are compatible with their coach, have positive cognitions about team
cohesion, are satisfied, self-confident, and less anxious will perceive their coach’s
behaviors more positively.
3:00-3:15 World literature's missing daughters: Folk tales, quantitative methods and
the nature and nurture of gender
Presenters: Christine Callanan, Kristen Manganini, Kimberly Parker,
Adam Tapply, Christopher Wall, and Alexis Webb
Advisor: Jon Gottschall
This paper presents results of four studies based on content analyses of two large
sources of literary data: 2,731 folktales from 40 collections representing a diversity of
historical periods, geographical regions, and levels of cultural complexity; and 44 “Cliffs
Notes” summaries of nineteenth century British novels. Novels and folktales were
content analyzed using computer analysis software, multiple human coders, and methods
that included human and computer components. The first project, “World Literature’s
Missing Daughters,” conceptually replicates work conducted by this research group in
previous semesters suggesting that an overall scarcity of female relative to male literary
characters may be universal in world folktales and, perhaps, other literary genres. The
second study, “The Beauty Double Standard,” tests the common idea that the ostensibly
greater emphasis on female relative to male attractiveness in western societies is an
outgrowth of socio-cultural pressures particular to western societies. The third study uses
folktale data to test the argument, current among many humanists and social scientists,
that “romantic love,” as we experience it today, was “invented” by westerners sometime
in the middle ages. The fourth study tests “strong social constructivist” arguments by
comparing certain broad patterns of male-female characterization and behavior in the
British novels to those encountered in world folktales. In opposition to the expectations
of strong constructivist models—which predict massive flux as we move among very
different types of societies--we find substantial regularity in most dimensions of malefemale
behavior and characterization. All four studies address important questions in
psychology and literary study, and all are relevant to debates over the nature and nurture
of gender.
3:15-3:30 Surface plasmon resonance in thin metal films
Todd Fallesen
Advisor: Catherine Jahncke
Surface plasmon resonance can be understood as a charge density wave or as an
interference effect in a thin metal film. The wave is excited by laser light, and it exists at
a particular critical angle for a given wavelength. We excite and measure surface
plasmon resonance in silver, gold and aluminum thin films using a total internal
reflection geometry. These measurements are made with a simple apparatus using a
differential gear box which will be described. The surface plasmon resonances are
compared with theoretical calculations for different film thicknesses and materials. In
addition, experiments are conducted see if this apparatus could be used to study lipid
bilayer membranes. The results of these experiments will be shown.
3:30-3:45 An inquiry into the Philosophy of Mathematics and its implications in
Quantum Mechanics.
Sarah Post
Advisors: Dr.’s Maegan Bos and Mike Sheard
In this project, I investigate the philosophy of mathematics in general and in
relation to the application of mathematics in science, using the specific example of the
mathematical foundations of quantum theory. I first give an overview and criticism of the
classical schools of thought in the philosophy of mathematics: Platonism, logicism, and
formalism. I then describe new theories which take into account the linguistic and
socially constructed nature of mathematics and which are more congenial to current
trends in philosophy in general and in the philosophy of science in particular. From these
theories, I draw out the philosophical implications, most importantly those pertaining to
epistemology, of the prevalence of mathematics in science. I argue that as mathematics is
a socially constructed representation of structures through a specific and highly logically
based manifestation of human reason. This philosophical description of mathematics
questions the ontological priority given to mathematics reasoning and also the
epistemological certainty given to mathematical formulations of reality, inline with
current trends in the philosophy of science. I then give a brief introduction to the
foundations of Quantum mechanics and the Dirac formalism in particular and discuss the
implications of such a view of mathematics to that of philosophy of science. It is my hope
that such an investigation offers a philosophical understanding that is more nuanced than
the previous absolutist views and which highlights the importance of creativity in both
the practice of pure mathematics and its applications in science.
POSTER PRESENTATIONS
1. Does habitat fragmentation alter space use patterns in deer mice
(Peromyscus maniculatus)?
Sarah Webster
Advisor: Erika L. Barthelmess
A significant threat to biodiversity is habitat fragmentation. As urbanization
increases, semi-natural landscapes like golf courses are becoming more important as
green spaces for wildlife. Golf courses are, however, fragmented landscapes. We
utilized the St. Lawrence University golf course to study whether habitat fragmentation
alters space use patterns in deer mice (Peromyscus maniculatus). We established small
mammal live-trapping grids on forested golf course “islands.” Each was paired with a
similar grid in a nearby unfragmented woodland. We trapped the grids for 8 weeks
during the summer. Animals were marked and their identification and trap location were
recorded with every capture. We used ArcView 3.3 software to calculate home ranges
for each animal captured at least three times. We compared home range sizes, the degree
of homerange overlap and the degree of “crowding” for animals from both the golf
course “islands” and the woodland patches. In general, home ranges were larger on
fragmented than unfragmented patches. On fragmented patches, home range size
increased with increased patch size, though a similar trend was not shown for animals on
unfragmented patches. Males on both fragmented and unfragmented patches had larger
home ranges than females. On fragmented patches, males and females shared their home
range areas with other mice, whereas on the unfragmented patches, males were less likely
to share space with other mice. Mice inhabiting the fragmented patches appeared to
share their home ranges with a larger number of individuals (i.e. experienced more
crowding) than did mice living in the unfragmented patches.
Simultaneity overpowers the effects of color on memory conjunction errors for
paired faces
Adam E. Christensen
Advisors: Dr. Alan Searleman & Dr. Sharon Hannigan
People sometimes make Memory Conjunction Errors, mistakenly perceiving a
new face as being one previously seen if it consists of features that occurred in two faces
seen earlier. A within-pair conjunction occurs when the features of the new face are
created using a combination of features within the same pair, while a between-pair
conjunction occurs when the new face is a combination of features from faces in different
pairs. The present study tested 108 participants and attempted to manipulate the number
and type of memory conjunction errors made by adding color to some of the faces. It was
thought that within-pair errors might increase and between-pair errors decrease when
pairs of faces were tinted the same color. Conversely, it was predicted that within-pair
errors would decrease and between-pair errors increase when the faces in each pair were
tinted different colors. During the test phase participants viewed 8 black and white faces
consisting of 2 new faces, 2 old faces, 2 within-pair conjunction faces, and 2 betweenpair
conjunction faces. The participants were asked to determine if each face was either
“OLD” or “NEW” and rate their confidence on a scale of 1-5. The results indicated that
there were highly significant main effects for Type of Face for both accuracy and
confidence. It was also observed that in terms of accuracy color was not able to
significantly alter the ratio of within to between memory conjunction errors. However,
color was shown to have a significant effect on the confidence ratings of participants.
Ranked feeding preferences of the sea urchins, Lytechinus variegatus and Arbacia
punctulata.
Courtney Saltonstall
Advisor: Dr. Brad Baldwin
Understanding the dietary preferences of sea urchins can provide us with key
information about their possible role in the environment. The two sea urchins, Lytechinus
variegatus and Arbacia punctulata, from the Gulf coast of Florida were tested in the lab
at SLU, for their feeding preferences for various plant and animal foods. Preferences
were determined by presenting each urchin with two food types simultaneously. The
short distance chemosensory abilities of the urchins were also tested by offering the
urchins paper tabs soaked with ground food, and tabs not soaked with food. Sargassum
sp. was the most preferred by Lytechinus, followed by shrimp, Ceraminum sp.,
Laminaria sp., Halymenia sp., Thalassia testudinum, Halimeda sp., and Ulva lactuca.
After various chemosensory treatments an average of 84% of Lytechinus were attracted to
the food soaked tabs. Halymenia and Halimeda were most preferred by Arbacia,
followed by shrimp, bread and butter sponge, Ulva lactuca, and Sargassum sp. However,
more feeding trials need to be conducted to better establish the preferences of Arbacia.
An average of 70% Arbacia chose food soaked paper tabs. These results may provide
insight into the physiological and nutritional requirements of these two urchins.
Furthermore, the urchins’ ability to detect the chemical nature of their food and
discriminate between different foods suggests that they may have a role in shaping the
algal and benthic communities in which they exist. Given the results, we may be
underestimating Lytechinus’s scavenging role as well as the control it has over brown
algae such as, Sargassum.
Power to bind: the effects of color on within-pair memory conjunction errors
Courtney E. Wheeler
Advisors: Dr. Sharon Hannigan and Dr. Alan Searleman
Memory conjunction errors are the miscombination of features from different
sources resulting in a false memory of a stimulus that hadn’t been previously viewed. A
within-pair conjunction occurs when the features of the new face are made from a
combination of features within the same pair, whereas a between-pair conjunction occurs
when the new face is created by features of faces from different pairs. The present study
investigated how color could influence memory conjunction errors for faces. The No
Color condition consisted of pairs of black and white faces. The Different Color
condition consisted of pairs of faces in which one face was tinted red and the other green.
In the Same Color condition, both faces were tinted either blue, red, or green. The 108
participants first viewed 3 pairs of faces and later received a recognition test that
consisted of 8 test faces (2 old, 2 new, 2 within-pair conjunction, and 2 between-pair
conjunction) in black and white. The task was to indicate whether the face was “OLD”
or “NEW” and state their confidence on a scale of 1 to 5. Significant main effects for
Type of Face were observed for both accuracy and confidence. Of particular interest, for
within-pair conjunction errors there were significantly more errors made in the Same
Color condition than in both the No Color and Different Color conditions. This suggests
that when both faces within a pair are tinted the same color, the color later acts as a
binding force to disrupt memory.
Sleep, risk perception and involvement in encouraged and discouraged risky
activities in early adolescence
Angela Nortz
Advisor: Dr. James Wallace
Are sleep-deprived children more susceptible to participation in risky activities?
Seventy-five students from the fourth, sixth and eighth grades completed two
questionnaires: One determined the participant’s regular sleep patterns and the other
asked about involvement in thirteen social and school-related activities. Six of the
activities were likely to be encouraged, and seven were likely to be discouraged by
parents. Correlation analyses found significant, but weak, relationships between total
sleep time and frequency of involvement in four of the risky activities, and there were
similar results for the relationships between total sleep time and risk perception in six of
the risky activities. Stepwise multiple regression analyses (in which the prediction of risk
participation was the dependent measure, and 12 variables were potential predictors)
indicated that sleep time contributed to the prediction of two of the discouraged risks.
Specifically, the more sleep deprived children were more apt to skip doing homework
and to skip classes. The findings suggest that sleep time may be a factor that contributes
to involvement in some risky activities in early adolescence. However, more research
will have to be done on this topic to determine the extent and strength of the influence.
Families coping with mother-loss: The relationship between family structure, social
support and adolescent adjustment.
Sara Goodnow
Advisors: Dr. Cathy Crosby-Currie and Dr. Steve Horwitz
The purpose of this study is to examine how the psychological adjustment of an
adolescent after the loss of a mother is mediated by the time allocation decision making
of the surviving father. In addition, the loss of a mother is also a loss of resources for the
family, and the surviving parent may be forced to alter his traditional role to compensate
for the loss of resources. Based on previous literature, we hypothesize that these time
allocation choices would also be influenced by the family’s social support network, the
father’s romantic relationship status, and the father’s job structure. In sum, the goal of
this project is to create a model of the relationship between time allocation decisions and
the resiliency—positive outcomes despite the presence of a major stress—of adolescents
coping with mother loss. We are also interested in how social support, the type of job the
suriving father has, and his history and current romantic relationship status relate to the
success of his time allocation choices. A qualitative methodology has been chosen due to
the lack of previous literature on parental loss and economic consideration. The study,
which is currently in the data collection stage, employs semi-structured interviews that
have the flexibility and openness to explore other issues to inform our model.
Olfactory recognition in canines: Do common scents matter?
Diana Puchalski
Advisor: Dr. David E. Hornung
The overall objective of this work was to assess the specificity of the olfactory
cues that canines use when identifying humans. That is, once a dog is trained to identify
the smell of a human (the target), will the dog be confused by the smell of other people
who use the target’s soap or deodorant? A 1-year-old golden retriever was trained to pick
her owner’s scent out of three possible choices. After a trial had been initiated by “go”
the dog would smell each of three boxes containing T-shirts impregnated with human
scent. The target was randomly assigned to one of the boxes. The boxes were constructed
such that the dog could not use visual cues. The dog signaled recognition of the target’s
smell by a sit/stay response. The dog was trained to correctly identify the target over 90%
of the time. When there was no target present the dog would repeatedly sample the three
boxes and 80% of the time give no recognition signal. The dog was rewarded only for
correct target responses. Probe trials consisting of the scent of non-related humans who
had used the soap and/or deodorant of the target were inserted into the testing sessions.
There was no reward given during a probe trial. When the scent of non-related humans
who used the soap or the deodorant of the target was inserted as a probe trial the dog gave
no recognition signal. This result suggests that added smells have no bearing on canine
olfactory recognition of humans.
Ontogeny of Basement Membrane Protein Expression in Rat Ovarian Follicles
Tommy Scott
Advisor: Dr. Karin J. Bodensteiner
The ovarian follicle is the primary unit of the female reproductive system,
containing the oocyte, layers of granulosa cells, and thecal cells in larger follicles.
Surrounding the layers of granulosa cells is the follicular basement membrane (BM),
made up of proteins such as collagen type IV, laminin, and fibronectin. The BM is
involved in cellular proliferation, differentiation, and migration and is essential for
normal follicular development. The BM is also responsible for maintaining the shape of
the follicle in vitro and knowledge of BM protein expression is necessary for follicular
culture. Immunohistochemistry was used to localize expression of BM proteins in the
ovaries of neonatal (4 and 7 days old), prepubertal (23 days old), and adult (60-90 days
old) rats. Ovaries were fixed in 4% paraformaldehyde and sections were cut at 8 µm.
Laminin was specific to the BM at all ages and in all types of follicles. Collagen type IV
was present in ovaries at all ages, but only appeared to be specific to the BM of
primordial and pre-antral follicles in neonatal rats. In older rats, collagen was localized to
the BM of antral and atretic follicles. Fibronectin was not successfully localized to the
BM at any age or at any stage of follicular development. While previous research has
demonstrated the presence of all three proteins in the BM, the current study provides
evidence that localization of collagen type IV in rat ovarian follicles would appear to be
dependent upon age. Reasons for this discrepancy are unknown and warrant further
investigation.
Computer simulation of uranyl smectite clays: Effect of tetrahedral charge on
interfacial structure
Hannah StellaLevinsohn
Advisor: Dr. Jeffery Greathouse
Smectite clays are naturally occurring clay minerals. An understanding of the
clay-water interface is important to many areas of geochemical interest. Montmorillonite
and vermiculite are common clay minerals in the Nevada Yucca Mountain region, so a
detailed picture of mineral-water interactions is important to understand the fate of
radionuclides in groundwater. Negative charge sites in the tetrahedral layer of
montmorillonite and vermiculite are due to substitution of Al3+ for Si4+. The cations in the
aqueous reigon balance the negative charge in the system. By examining the effects of the
tetrahedral Al charge on interlayer structure of sodium clays, we developed a more
accurate model of clay-solution interactions. In our model, the charge on the tetrahedral
Al is delocalized among surrounding oxygen atoms. The Molecular dynamics program
DL_POLY 1 will allow equilibrated Monte Carlo clay-water configurations to be
simulated with a flexible molecule force field. The equilibrated system from the Monte
Carlo simulations will be then converted into a file that can be read by DL_POLY. The
flexible model force fields are important when investigating the surface relaxation at the
tetrahedral charge site, and when looking at the movement clay OH group. The molecular
dynamic simulations will be run to obtain adsorption energies and an understanding of
the migratory tendencies of the uranyl ion.
1Forester, T.R., and Smith, W., DL_POLY User Manual (CCLRC, Daresbury Laboratory, Warrington, UK, 1995).
Age related changes in olfactory perception
Emily Putney
Advisor: Dr. David Hornung
Although an age related decline in olfactory ability has been documented, the
effect of aging specifically on odorant quality perception has been difficult to assess since
there is an interaction between the intensity and quality components of olfactory
perception. Thus, the present study was designed to test the hypothesis that aging changes
olfactory quality perception independently of changes in odor intensity. For each
participant who passed an initial screening of her/his ability to recognize odors, a
psychophysical intensity curve was generated based on the averaged responses to six
concentrations of four odors (rose, vanilla, rubbing alcohol and ammonia). From these
curves, the concentrations that resulted in intensity ratings of 10 and 30 for each of the
four odorants were determined for each subject. Young (18-25 yrs.) and elderly (≥65 yrs.)
subjects were then given all combinations of two concentrations of four odors in pairs
and asked to indicate, using the Green Scale, the dissimilarity rating for the two odors in
each pair. These dissimilarity ratings were then subjected to Multi-dimensional Scaling
Analysis to determine the location of the subjects relative to each other in psychophysical
space. Since the young and the elderly seem to be located in different psychophysical
spaces, the data is consistent with the hypothesis that in the elderly there is a change in
olfactory perception that is independent of odorant intensity. An analysis of the
psychophysical spaces for the individual odorants may provide some indication if this is
primarily a change in olfactory or trigeminal perception.
METADISE simulations of various quartz surfaces
Megan Roppolo
Advisor: Dr. Jeff Greathouse
In this project, the surface energies for the (101), (100) and (010) quartz surfaces
were studied. Bulk quartz was created and flexible surfaces were cleaved and minimized
using the METADISE program with two-dimensional, periodic boundary conditions.
Energy minimizations were performed for pure and hydroxylated surfaces. A
hydroxylated surface was created by dissociatively adsorbing one water molecule per unit
cell:
SinO2n(s) + H2O(l) SinO2n-1 + (OH)2(s)
The flexible portion of the surface remains in contact with a rigid bulk portion of quartz.
Calculations were also performed on quartz slabs, in which two flexible surfaces
are joined. Slabs can then be used for molecular dynamics simulations using threedimensional,
periodic boundary conditions.
Surface calculations were found to be in agreement with those found by Parker
and DeLeeuw. These surfaces and surface energies were studied for various models,
including the shell, clayff, and Van Beest models.
Kinship recognition through olfaction in a canine
Amanda Leitch
Advisor: Dr. David Hornung
The overall objective of this study was to assess the specificity of the olfactory
cues that canines use when identifying humans. That is, once a dog is trained to identify
the smell of a human (the target), will the dog be confused by the smell of the target’s
siblings? A 1-year-old golden retriever was trained to pick her owner’s scent out of three
possible choices. After a trial had been initiated by “go” the dog would smell each of
three boxes containing T-shirts impregnated with human scent. The target was randomly
assigned to one of the boxes. The boxes were constructed such that the dog could not use
visual cues. The dog signaled recognition of the target’s smell by a sit/stay response. The
dog was trained to correctly identify the target over 90% of the time. When there was no
target present the dog would repeatedly sample the three boxes and 80% of the time
would not give the recognition signal. The dog was rewarded only for correct target
responses. Probe trials consisting of the scent of the target’s siblings and no target scent
were randomly inserted throughout the testing sessions. There was no reward given
during a probe trial. Despite what other studies have shown, the dog did not give the
recognition response more often to the smell of the target’s siblings as compared to the
smell of non-related humans. Further testing is necessary to determine if there is any link
between genetics (for instance HLA typing) and scent.
Approximate confidence interval estimation for beta-binomial proportions of
biometric identification devices
Travis Atkinson
Advisor: Dr. Michael Schuckers
The goal of this project was to determine the performance of confidence
interval estimation using the methodology of Agresti and Coull (1998) on proportions
from a Beta-binomial distribution. Agresti and Coull applied their approach to the
binomial distribution, specifically for estimation proportions. In this research we tried
determine the appropriate manner in which to extend that work to proportions from a
Beta-binomial distribution. In particular we were interested in applying such a
methodology to data from biometric identification devices such as fingerprint scanners or
iris recognitions systems. The approach we took was to simulate data from a variety of
Beta-binomial distributions and compare the performance of the augmented approach of
Agresti and Coull to more traditional approaches to interval estimation. Specifically we
considered four ways to extend this work. For the binomial n independent binary
observations are augmented with 2 successes and two failures. For the Beta-binomial we
have k individuals with m binary observations each. To augment the Beta-binomial data,
we first considered adding 2 successes and 2 failures to a single individual. Second we
considered adding a success and a failure to the counts for 2 individuals. Third we
considered adding 1 success to the data from each of 2 individuals and 1 failure to the
data for 2 different individuals. Last we considered adding a new individual n+1 who was
given 2 successes and 2 failures. We used a Monte Carlo approach for evaluating the
performance of these four augmented approaches.
Effects of inhibition of Sphingosine Kinase with Dimethylsphingosine and
dihydrosphingosine on calcium signaling in jurkat t-cells
Jane W. Mutoru
Advisor: Dr. Nadia Marano
Sphingosine Kinase (SK) plays a significant role in Ca2+ signaling in T-cells.
During T-cell activation the enzyme catalyzes the phosphorylation of Sphingosine (S) to
Sphingosine 1-Phosphate (S1P) using Adenosine Triphosphate (ATP) as the phosphate
donor. This important function of sphingosine kinase can be inhibited by such inhibitors
as dimethylsphingosine (dimethyl-S) and dihydrosphingosine (dihydro-S), which
compete for the active site of the substrate, Sphingosine. Consequently, impeding the
production of S1P, hindering Ca2+ signaling and inhibiting the generation of cytokine
genes. Consistence with this was the main objective of our study: to determine the effect
inhibition of SK with dimethyl-S and dihydro-S on Ca2+ signaling, cell viability and cell
apoptosis using Jurkat helper T-cells. Our results, though not conclusive, suggest that
high concentrations of the inhibitors have some effect in lowering Ca2+ concentrations
and also exhibit increased toxicity that lead to low cell viabilities.
The physical attractiveness stereotype in cross-cultural folk tales
Adam J. Tapply
Advisor: Jonathan Gottschall
Is the physical attractiveness stereotype a cross-cultural phenomenon with roots in
universal aspects of human psychology or is it a product of socialization environments
particular to individual societies or types of societies? This study was based on a multicoder
quantitative content analysis of random samples of 658 folk tales from 48 culture
areas and of 240 summaries of plot and character information from works of western
canonical literature. It tested the prediction generated from theory and research on the
physical attractiveness stereotype: protagonist characters will be both more likely to be
portrayed as physically attractive, and less likely to be portrayed as physically
unattractive, than antagonists. The assumption inherent in this prediction is that
protagonist characters will be, as a general rule, far more likely to be portrayed as “good”
than antagonist characters. Our main finding is that there is solid statistical evidence for
the existence of a physical attractiveness stereotype across two large and culturally
diverse literature samples. The prediction of this research was supported: across
centuries and regions of the world, protagonist characters were both more likely to be
defined as attractive than were antagonist characters and less likely to be defined as
unattractive. Our findings suggest that the physical attractiveness stereotype is not
limited to western societies, but is a cross-cultural phenomenon present even in pre-state
societies. If this is true, then it is possible that the physical attractiveness stereotype is a
prejudice people are born with rather than an arbitrary product of particular socialization environments
Promoter activity of the human chromosome 17p13.1 12-Lipoxygenase gene in cancer cells.
Matthew Benard
Advisor: Dr. Michael Temkin
12-Lipoxygenase (12-LOX) is one of several enzymes responsible for the
metabolism of arachidonic acid (AA). While biologically necessary, the metabolites
generated in this process have been found to have roles in the development and
metastasis of several types of cancers including breast, lung, prostate, and colorectal. The
promoter for the gene that codes for this enzyme has not been definitively identified,
partially due to the lack of typically found consensus sequences such as the TATA and
CCAAT boxes. A 1083 base pair and a 551 base pair sequence upstream of the 5’ end of
the gene were individually cloned into a reporter vector containing the Green Fluorescent
Protein (GFP) gene. Jurkat (human leukemia) cells transfected with the reporter plasmid
were cultured and the activity of the promoter was quantified via confocal microscopy
and fluorometry.
Ambient air quality study at SLU
Josh Onyan
Advisor: Dr. Ning Gao
Continuing studies are being conducted to develop an interactive computerized
mass balance model of the Little River watershed using the STELLA computer software.
Water samples at varying locations along the Little River and ambient air samples at a
location close to the watershed will be collected and analyzed. The resulting monitoring
data will be incorporated into the mass balance model. This study will facilitate the
evaluation of the environmental quality of the watershed.To collect ambient air samples,
an ambient air sampler needs to be created with existing technology. The apparatus
consists of a cyclone, two denuders, and a filter pack. The cyclone device uses a set
velocity of airflow to eliminate airborne particles larger than 2.5µm, which would not be
of concern because they are too large to enter the respiratory system.1 The two denuders,
one which is coated with a basic substrate and the other that is coated with an acidic
substrate allow the collection of acidic or basic gaseous species present in ambient air.
The filter pack contains multiple filters used to collect the particles entering through the
cyclone and the two denuders.2 Using gravimetric analysis, scanning electron
microscopy, and ion chromatography, the airborne particle mass concentration, gaseous
acidic and basic inorganic species, ionic species and trace elements on airborne particles
could be determined.3 Thus an understanding on chemical composition and concentration
levels of ambient air contaminants could be established.
The effects of pH on the accumulation of Zn and Cu in the common cattail (Typha
latifolia)
Bryan Tolcser
Advisor: Wil Rivers
Approximately 1000 Superfund sites were identified by the EPA’s National
Priorities List of 1986, and 40% of them involve heavy metal contamination of some sort
(Förstner, 1995). Extracting heavy metals via tolerant plants, a process called
phytoextraction, is still in experimental stages. Unfortunately, most metal tolerant plants
are small and slow growing, thus making the net worth of phytoextraction low. Current
research is primarily focused upon increasing the accumulation per unit of biomass to
make phytoextraction an economically worthwhile endeavor. Indications have been made
in recent research (Shahandeh and Hossner, 2002; Manios, et al. 2003) that soil acidity
increases the ability of tolerant plants to accumulate heavy metals. Typha latifolia
rhizomes were collected from the St. Lawrence University Golf Course and were grown
for 4 weeks in 15% Hoagland’s Solution. Seedlings of like biomass were then grown in
experimental solutions A - F containing 10 mg/L Zn (supplied as zinc sulfate) and 10
mg/L Cu (supplied as copper sulfate) for 14 days at pH’s of 5.5, 6.0, or 6.5. Group Z was
added as a control. Plants samples were then removed from solution and analyzed for
heavy metal concentration with a Varian Atomic Absorption Spectrophotometer (AA-
10). Those plants grown in low pH solutions are anticipated to have higher concentrations
of heavy metals. This poster will present results showing mean heavy metal concentration
for all experimental groups. An ANOVA test will be done to confirm or deny
significance of pH on the accumulation of Zn and Cu in T. latifolia.
Student partners in creating new science spaces
Kelsey L. Hochstatter (On behalf of past student coordinators and the Student
Committee)
Advisor: Thomas C. Greene (On behalf of the Executive Committee and Science
Department Chairs)
A college building design that shortchanges student learning fails to meet its most
important programming goal. Among the ways to improve the way spaces address
student needs is to involve them in process of creating new ones. Like faculty, students
are “using clients,” and they, rather than administrators or designers, are the natural
partners of faculty in programming new space. This poster will visually document 5
years of student-faculty partnerships that will culminate in the construction of a $60
Million science building beginning in April of next year.
Subsurface investigation into the internal architecture of lacustrine strandline
deposits, Northern New York
Christopher W. Stevens
Advisor: Dr. Stephen Robinson
The retreat of the Laurentide Ice Sheet from the St. Lawrence Lowlands
approximately 12,500 yr. B.P., combined with an ice-blocked outlet near Covey Hill,
Quebec led to the development of Glacial Lake Iroquois, in which the water-covered
lowlands were continuous with the Lake Ontario basin. Fluctuations in this former water
body left evidence for four significant lake stages, as defined by numerous strandlines of
well-sorted delta and beach deposits in areas of New York north of the Adirondack
Mountains. Owing to post-glacial base level declines, these deltas are now deeply
incised by the very rivers that formed them. Ground penetrating radar (GPR) surveys
were conducted across four remnant deltas of two distinct lake stages, to map their
internal architecture, depositional environment, thickness, and indications of ostdepositional
structures. Utilizing 50 and 100 MHz antennas, delta thickness were found
to vary but are generally between 10 to >20 m. High-resolution (GPR) profiles exhibit
variable reflector continuity, and are interpreted as showing the sedimentary facies of
shifting channels, topset, foreset and bottomset bedding, along with erosional
unconformities and potential failure planes. The presence of short-lived directions of
deposition, varying lobes and zones of reworked homogeneous material suggests an
environment of fluctuating energy and shifting channels. A significant number of
scattered large boulders are interpreted to be present within the deltas, are interpreted as
either dropstones or material transported by higher energy. These stranded deltas are
well drained, coarse grained and easily accessible, making them ideal sites for GPR
surveying.
Expression of sodium bicarbonate cotransporter genes during postnatal
development of the rat medulla
Camille Michaud
Advisor: Dr. Michael Temkin
Astrocytes have been hypothesized to mediate neuron controlled changes in
ventilation by regulating extracellular pH in CO2-sensitive respiratory centers of the
brainstem through the activity of the sodium bicarbonate cotransporter, NBC 1.
According to the proposed hypothesis, NBC 1 molecules pump carbonate ions from the
extracellular space into the cytoplasm of astrocytes. Removing carbonate ions from the
extracellular space would cause a decrease in pH, stimulating neurons in the CO2-
sensitive respiratory centers. The goal of this study was to determine if astrocytes in the
nucleus tractus solitarii (NTS), a CO2-sensitive region of the brainstem, expresses NBC
1. In situ hybridization was used to detect the presence of NBC 1 and NBC 2 mRNAs, as
well as the expression of the astrocyte specific genes, glial fibrillary acidic protein
(GFAP) and glutamine synthetase (GS), and neuron a specific gene neurofilament light
(NFL) for comparison. Probes labeled with either fluorescein, Texas-red X, or 630-650
were visualized using either confocal or epifluorescent microscopy. The results of this
study indicate that NBC 1 and NBC 2 mRNAs occur in a wide variety of cells within the
brainstem and that astrocytes both inside and outside of CO2-sensitive respiratory centers
express NBC1.
Long and short sleepers: Impact of sleep on profiles of illness symptoms.
Lindsay Havlicek
Advisor: Dr. Pamela Thacher
Although many studies implicate shortened sleep as a possible cause of increased
rates of illness, few studies have examined this link prospectively. In our study we
examined the relationship between self-reports of sleep quantity and viral symptoms. 34
SLU students participated for $10 or extra credit points for a psychology course.
Symptom presence/severity were reported daily for one week via email messaging.
Rating scales for symptoms ranged from 1-7 on a Likert scale. Subjects also kept daily
sleep diaries to track bed times, wake times, sleep latency time and time up during the
night to estimate total sleep time on each night of study participation. Several
participants also wore an “actigraph” (a wristwatch like device) to detect motion which
was used to validate self-report of sleep length. Participants also completed the Beck
Depression Inventory, stress measures, and a measure of evening/morning activity
preference.
The ventilatory effects of sodium bicarbonate transport inhibition in the conscious
rat.
Stephanie Murray and Michelle Zugermayr
Advisor: Dr. Joseph Erlichman
This study examines the ventilatory effects of selective inhibition of NBC in
brainstem sites involved in central respiratory control, such as the NTS and the RTN.
The NBC usually transports 2 HCO3
- and 1 Na+ into the cell when the cell is depolarized
relative to the equilibrium potential for the transporter. Increased neuronal activity
elevates extracellular potassium, depolarizing glia, and enhancing the inward movement
of HCO3
- and Na+, which alkalinizes the glia. The movement of HCO3
- may effectively
decrease the buffering power of the extracellular fluid, resulting in an acid shift. Since
decreased pH effectively acidifies pHi, the activity of CO2 chemosensory neurons will
increase when NBC is active. It is our hypothesis that glial regulatory mechanisms alter
the neuronal processing of chemosensory information. Eleven adult Sprague-Dawley rats
of either sex weighing between 250 and 350g had a push-pull cannula placed into either
of the two respiratory brainstem sites (5 RTN, 6 NTS), following surgical procedures.
The NBC transport inhibitor DIDS 0.5mM was perfused into the NTS or RTN via the
cannula, while ventilation was measured using a whole-body plethysmograph. The
animal’s response to CO2 is evaluated by increasing the CO2 concentration in the
plethysmograph in 2% increments to a maximum of 8%, for 10 minutes at each
increment. Results show that DIDS in the NTS caused a significant increase in
ventilation (n= 6; p< .05). In the RTN however, ventilation is significantly depressed but
only at a CO2 concentration of 4%.
Water quality study and mass balance modeling for the Little River Watershed
Alexis Kostun
Advisor: Dr. Ning Gao
The concentrations of various ions and dissolved oxygen in river water is of great
interest to environmental quality assessment. These concentration data can be used to
create a mass balance model, specifically in this study of the Little River Watershed.
Vernier probes are used to monitor the concentrations of ammonium, calcium,
and nitrate ions, dissolved oxygen, and pH of the water thereby yielding water quality
data. The existing procedure will be refined to determine the necessary parameters to
ensure reliable data. Another aspect of this project is to continue the development of a
mass balance model for the Little Watershed to evaluate its overall environmental
quality. My goal is to complete the necessary components of an existing, very simple
mass balance model that had been constructed by a former student by using the STELLA
computer software and by generating my own field monitoring data and gathering
additional data from other researchers on and off SLU campus. The combined
environmental and hydrological data sets will be compiled into the mass balance model
to test its performance. The refined mass balance model will then be used to predict what
the steady state conditions would be for the Little River Watershed when the inputs and
outputs of the various chemical constituents are altered. Various literature searches will
be conducted to determine the necessary equations to be used in the mass balance model
to account for ground water, sedimentation, and atmospheric deposition on the ion
concentrations.
The physics of music: standing waves in musical instruments
Sandy Lampreda
Advisor: Dr. Catherine Jahncke
The purpose of this project was to find and reproduce class room demonstrations
for an introductory level physics of music class. In addition I will present handouts and
laboratory directions for students to accompany these demonstrations. I replicated three
different demonstrations that dealt with both physics and music. For the first
demonstration I built an amplifier to connect to a microphone and oscilloscope to
demonstrate the different waveforms produced by different musical instruments and of
different notes. I also captured these waveforms with a computer that performed a
Fourier analysis so that the spectrum of the waveform could be studies. The second
experiment concentrated on stringed musical instruments such as the guitar. The purpose
of this experiment was to demonstrate standing waves on a lead filled hose to better
understand the harmonic series and the working of many musical instruments. The third
experiment was to build a wind chime. Using my knowledge about standing waves and
music, I constructed a set of wind chimes in which each hanging rod produces a clear
tone, and the combination of rods generates a chord.
Single beam holography
Scott P Cipriano
Advisor: Catherine Jahncke
The process of holography, as coined by the Hungarian physicist Dennis Gabor,
was originally investigated in an attempt to increase the resolution of the current electron
microscope. Gabor ended up using a light beam instead of a beam of electrons to make
the first hologram, but it wasn’t till 1960’s when the LASER was invented that
holography begin to take off. Since Gabor’s original design numerous processes have
developed that each create unique types of holograms. For the purposes of this project
these different variations have been studied and several have been replicated.
Modeling disease: mathematics in epidemiology and applications to the SARS virus
Katie Livingstone
Advisor: Dr. Patti Frazer Lock
Epidemiology is a field of science that has made many significant advances in
studies of the spread of disease. Studies of epidemics and disease spread have vast
mathematical components. Epidemiological models are based on differential equations
that provide the foundations for modeling change over time. These are useful in
modeling rates of infection, rates of recovery, contact rates, birth and death rates, etc.
Such models can predict the impact of a disease on a population and can suggest valuable
strategies for its control. This study presented the most basic epidemiological model and
examined the common uses and implications of certain features. It looked at several
more complex models and explained how to modify a disease model according to the
characteristics of a disease. Lastly, this study examined how researchers have modeled
SARS, one of the most recent disease outbreaks, in three published articles.
Flux of cosmic ray muons at low energies
Jeremy Ouellette
Advisor: Daniel Koon
Muons are one the more easily observed fundamental particles. Created in the
upper atmosphere due to collisions of cosmic protons and atmospheric nuclei, they come
streaking down to earth at a wide variety of energies. The number of muons (flux)
present at high energies is well known, but low energy measurements have been more
difficult to find. At these low energies, local atmospheric conditions such as humidity
and air pressure may have a much larger effect on these particles. Extrapolation from the
well known high energy data allow us to create a simple theoretical model of the low
energy muon flux, and the effect of atmospheric conditions on this spectrum can be
experimentally tested using a simple apparatus. The theory, experimental apparatus,
analysis, and results will be discussed.
Group theory and crystals: factor group analysis and Raman spectroscopy
Sarah Post
Advisor: Dr. Catherine Jahncke
In this project I use the methods of group theory and symmetry groups to describe
the optically active modes of vibration, specifically those which are Raman active, and
verify these results through the testing of several crystal spectra. Raman spectroscopy is
accomplished by directing a laser beam at a sample and looking at the scattered light
through a spectrometer with a very sensitive detector. The energy from the laser can
interact with the crystal in two ways; it can either scatter with the same incident energy or
be shifted by a factor corresponding to the vibrational energy of the crystal.
In order to predict the number of Raman active vibrations it is necessary to apply
group theory to the crystal structure in the form of a factor group analysis, which
describes the correlation between site symmetries and point groups. This method gives a
way of determining the optically active modes of vibration and the types of spectra
involved, ie. Raman or Infra Red. I then follow this analysis for Diamond, Sapphire
(Al2O3), Rutile and Anatase (TiO2) and Salt crystals and verify these results through an
analysis of their spectra as obtained using the Raman spectrometer. From these results, I
determine the validity of the factor group analysis of crystal spectra and suggest a
possible application of determining differences in crystal structure of the same molecular
composition from the case of a difference in number of Raman active modes.
Effects of maternal separation on subsequent maternal behavior in Sprague
Dawley rats
Stephanie Miner
Advisors: Dr. Karin Bodensteiner and Dr. Loraina Ghiraldi
This study was designed to assess how early maternal care influences subsequent
maternal behavior in rats. It was hypothesized that females separated from their mothers
as pups would show deficits in maternal behavior as adults. Female Sprague-Dawley rats
were separated from their mothers for 6-hr (long term/LT), 3-hr (short term/ST), or 0-hr
(control/C). At maturity, subjects were mated. Litters were culled to 2 male and 2
female pups on postnatal (PN) Day 1. Maternal behavior testing began on PN Day 2 and
continued for 16 days. Lactation performance (pup weight change), nest building, nest
defense, hovering, and grouping were examined. Analysis of variance and t-tests
revealed that LT rats used significantly more cotton and built higher quality nests than
other groups. Also, LT subjects tended to take less time than C subjects to group their
young (p=0.074). There was no effect of maternal separation on lactation performance,
nest defense, or hovering, and, as expected, maternal behavior decreased across all
variables as the postpartum period progressed. Additional analyses revealed that LT
females tended to begin estrous before C females (p=0.071) and to deliver more pups
than C (p=0.053) and ST (p=0.058) females. Further research on these parameters is
warranted. Contrary to the hypotheses, these results reveal that early maternal separation
may enhance some aspects of maternal behavior. Research examining the effects of
parity on the maternal behavior of previously separated pups is in progress.
Role of the Locus Coeruleus in ventilatory control in the conscious rat
Amanda Fix, Jess Kolling, Ryan Lawless, Stephanie Murray, and Michelle
Zugermayr
Advisor: Dr. Joseph Erlichman
The LC has been implicated in physiological functions including arousal, anxiety,
pain processing and more recently respiratory control. To evaluate the role of the LC in
ventilatory control, we created bilateral lesions of the LC using kainic acid (KA).
Ventilatory measurements were made using a whole-body plethysmograph 1-7 and 14
days after lesioning. Rats microinjected 5 mM KA in 100 nL showed a 15% decrease in
minute ventilation (VE) during normocapnia and a 11% decrease during hypercapnia (8%
CO2) compared to artificial cerebral spinal fluid (aCSF) injected controls (n = 4 and n =
2, respectively, p > 0.05). In separate experiments, focal perfusion of hypercapnic aCSF,
substance P, and norepinephrine unilaterally had no consistent effect on VE. To assess
the effects of bilateral LC lesions on pain processing we measured tail flick latencies in
rats injected bilaterally with KA before and 4 and 10 days post-lesion (n = 6). Tail flick
latencies were significantly longer 4 days after lesion placement (p<0.05), suggesting that
the LC contributes little to respiratory control in the conscious rat, but plays an important
role in descending pain control.
Computer simulations of smectite clay minerals
Matthew Thompson
Advisor: Jeffery Greathouse
The study of clay-water interfaces has many applications, such as nuclear waste
disposal, ground water contamination removal, and catalysis. Smectite clays are
inorganic polymer sheets composed of an alumina octahedral layer between silica
tetrahedral layers. These clays are characterized by a permanent negative charge residing
in either the octahedral or tetrahedral layers.
For our simulations there were two simulation methods employed. We first
utilized a Monte Carlo technique in order to obtain a system that is equilibrated. The next
step in the process is then to use molecular dynamics to continue the simulation from the
25
equilibrated systems. Thus far, our results with sodium cations in the aqueous layers are
similar to that of the rigid model. More precisely – the sodium cations reside in the
midplane of the aqueous layer and tend not to be attracted toward the surface of the clay.
Allelopathic effects of pale swallow-wort (V. rossicum) on Wisconsin fast plants
(Brassica rapa)
Arthur Andrews
Advisor: Dr. Wil Rivers
This study examines the potential allelopathic effects of pale swallow-wort (V.
rossicum), an invasive species now found in northern New York and Canada, on the seed
germination of other plant species. Preliminary studies using the seeds of Wisconsin fast
plants have demonstrated that 90% of the seeds germinate without pale swallow-wort
extract, while only 53% germinate in the presence of the extract. As germination
experiments continue, the results of the preliminary work suggest that an allelopathic
response may be one explanation for the success of pale swallow-wort as an invasive
species.
Ontogenetic changes in gene expression of glial cells and neurons demonstrated by
RNase protection assays
Esther Ndungo
Advisor: Dr. Michael Temkin
The goals of this research project were 1) to develop protocols to use an RNase
protection assay (RPA) to simultaneously measure levels of gene expression for glia,
neuron, and key pH regulatory proteins of the rat brain, and 2) to follow the ontogenetic
expression of these genes during postnatal development of rat by examining 11, 22 and
36 day old rats. The data from this project will be used to help evaluate the hypothesis
that astrocytes in the medulla mediate ventilatory responses to CO2 using pH regulatory
molecules, including sodium bicarbonate cotransporter 1 (NBC1). Partial mRNA
sequences for six different proteins, two pH regulators, NBC 1 and NBC 2, three
astrocyte markers, glial fibrillary acidic protein α (GFAPα), GFAPδ, and glutamine
synthetase (GS), and a neuronal marker, neurofilament light (NF-L) from the brainstem
of 22 day old rats were obtained by reverse transcription-polymerase chain reaction (RTPCR).
RT-PCR products were cloned into a vector DNA and sequenced. Plasmid
constructs were used as template for in vitro transcription reactions to generate antisense
26
RNA probes for RPA. RPA analysis was used to measure relative levels of gene
expression in different regions of the medulla of rats of different ages.
Percent composition of zebra mussels (Dreissena polymorpha) and quagga
mussles (D. bugensis) in the St. Lawrence River from Cape Vincent to Massena,
NY.
Jonathan Redman
Advisor: Dr. Brad Baldwin
Freshwater mussels Dreissena polymorpha and D. bugensis populations were
examined in the St. Lawrence River from Cape Vincent to Massena, NY. Navigational
buoys were observed for surface area coverage of mussels, sampled for species
composition and shell sizes of D. polymorpha and D. bugensis. There was a decline of
the surface area of mussels on the buoys from 50% in Cape Vincent to less than 1% in
Ogdensburg, NY. Of the samples processed thus far, there is a downstream trend of
buoys dominated by D. bugensis with a range from 78.96% to 100% composition, and a
decline in the composition of D. polymorpha (Cape Vincent 21.04% and Point Vivian
0%). The normal curve of the size frequency distribution suggested that there was one
major reproductive cycle in the summer that produced an abundance of small mussels (3-
5mm).
Campus tree inventory and GIS database for St. Lawrence University Campus
Josh Earl
Advisor: Dr. Wil Rivers
This study was designed to collect an inventory of the trees found in the
“walking” part of campus. While this is not an exhaustive list of the trees found on St.
Lawrence property, the main purpose of this study is to create a baseline GIS
(Geographic Information System) of the distribution of tree species within several
minutes of the science buildings. An inventory of trees on St. Lawrence campus
compiled in a GIS will provide a visual groundwork for various future opportunities.
Data includes genus species, DBH, and latitude/longitude coordinates for each tree in the
study area. All data is collected with the Cybertracker unit. Differential correcting of the
coordinates is acquired through the use of software online. Spatial representation of all
data points are provided through ESRI’s Arcview 3.3 software.
Possible results of this project include further development of campus vegetation.
Arboretums (a collection of woody plants representing the suite of a vegetative
community) are used across the world as an educational and aesthetic tool. Trees are
strategically planted to provide food, habitat, and protection for numerous organisms
which live in a forest community. Classes studying the importance of biodiversity,
ecology, and general biology would all benefit from an arboretum. As this project
involves finding the spatial representation of species diversity on campus, it would
provide insight as to the best place an arboretum could be developed on this campus. In
addition to the pedagogical benefits of an arboretum, the aesthetic benefit of is
significant.
The relationship between age, climate and tree ring width for Balsam Fir (Abies
balsamea)
Lucas Buckingham
Advisor: Dr. Stephen Robinson
A series of tree ring cores were collected from a stand of Abies balsamea (balsam
fir) on Whiteface Mountain in Wilmington, New York. This stand is located on the edge
of the Veteran’s Memorial Highway at approximately 4000 feet above sea level, and
about 600 feet below treeline. The aims of this study are to correlate annual tree ring data
(width) with temperature and precipitiation data, in hopes of extending the local climate
measurement dataset back in time. The standard procedure involves the collection of
core samples at 1.4 meters above ground level or approximately breast height. Twenty
cores from live trees were collected in this manner in addition to 7 tree discs from dead
trees to obtain a history that could extend further back in time than the cores. The cores
and discs were then prepared so that they could be analyzed by DendroScan software,
which allows the digital measurement of tree ring width. This data will be compiled with
age to discern any trends with stand age, and the width of the tree rings will also be
compared to temperature and precipitation to examine past climate variability.
Examination of the viability of bioelectrical impedance analysis (BIA) to determine
body condition in Erethizon dorsatum (the North American Porcupine)
Ian Hubbard
Advisor: Dr. Erika Barthelmess
A study examining the viability of bioelectrical impedance analysis (BIA) as a
means for monitoring body condition in the North American Porcupine (Erethizon
dorsatum). This study calibrated RJL Systems portable bioelectrical impedance analysis
monitoring equipment to provide accurate readings for total body fat in the North
American Porcupine. In addition to calibrating BIA equipment for use in Erethizon
dorsatum, researchers also collected a data pool of BIA readings for the population of
Erethizon dorsatum living in the St. Lawrence University Kip Tract natural area in the
fall of 2003. From this data an understanding of body fat deposition trends was provided
for the North American porcupine in the fall season.
Discovery of large population of sea urchins, Diadema a. at San Salvador Island,
Bahamas and community outreach efforts with local Bahamians.
Woodward1, E., Saltonstall1, C., Krug1, J., and Voegeli2, S.
1St. Lawrence University
2Gerace Research Center, San Salvador, Bahamas
Advisor: Dr. Brad Baldwin
Many studies indicate the important top-down role that the long-spined sea urchin
(Diadema anitllarum) plays with respect to controlling populations of macroalgae on
coral reefs. Populations of Diadema remain low on coral reefs along San Salvador Island,
Bahamas. However, in January 2004 we discovered a relatively dense population (over
80 individuals total; up to 4 individuals /m2) of large (mean test diameter 9.1 cm)
Diadema in a protected mangrove lagoon on San Salvador called Pigeon Creek. Very few
juvenile urchins were found, suggesting infrequent recruitment to the lagoon. The density
and diversity of macroalgae is lower in the lagoon as compared with that on near shore
reefs where we conducted fish, soft coral and urchin snorkel and scuba surveys. We are
planning reproductive studies with these Diadema to maintain and increase local
populations. We are also in the process of documenting this important nursery area to
help identify Pigeon Creek as a candidate for future marine protection. Educating local
Bahamians about our research and the importance of these urchins is also vital to the
recruitment and survival of the Diadema and surrounding coral reefs. We began this
public outreach effort with local sixth and seventh grade classes on the island, and plan to
continue it in the future.
Does dam activity restrict gene flow?: a test using E. complanata
Brendan Michael Hayes
Advisor: Dr. Michael H. Temkin
The Raquette River is the second longest river in New York State, and has had its
hydrology tremendously altered by human activity. The river has twenty-one main
branch and three tributary dams built for either hydroelectric power generation or the
creation of reservoirs. Elliptio complanata, a freshwater mussel ubiquitous in the St.
Lawrence River basin, has provided preliminary evidence that it can be used to elucidate
questions about flow changes and stream capture events using mtDNA. E. complanata
has a sedentary lifestyle, but does have an ecto-parasitic larval stage that relies on
attachment to fish gills for dispersal. Raquette River dams were built without fish ladders
making them potential sources of habitat fragmentation. Our question is to see if nuclear
DNA could be used to analyze the impact that dam activity has on gene flow on the
Raquette River.
During the summer of 2003 specimens of E. complanata were collected from
sixteen sites on the main branch and eleven tributary sites in the Raquette River basin.
DNA was isolated from mussel foot tissue in an attempt to identify patterns of gene flow
by looking at polymorphic alleles in the Raquette River E. complanata population.
Although the use of RAPD proved problematic, micro-satellite primers fashioned
for species of the Lampsilis genus have provided indications that they can be used to
answer our questions regarding gene flow.
Hydrogeological assessment of the Little River drainage basin: comparison of river
stage, groundwater flow, and precipitation
Brendan Lennon
Advisor: Dr. Stephen Robinson
This study expands on previous hydrogeological work on the Kip Tract
piezometers transect located on the field at the Pike Street and Route 68 intersection, and
the Little River. Head and stage are related to precipitation data downloaded from the
weather station located in the field behind the St. Lawrence University physical plant.
Data loggers were placed at three locations on the Little River, at the Pike Street Bridge,
Park Street Bridge, and at the Little River and Grasse River Confluence. The Kip Tract
transect consists of a suite of four piezometers, with each nest containing four
piezometers, at depths of approximately 3,6,8 and 10 meters. Groundwater level was
measured manually using a hand held meter, in addition to four loggers strategically
placed along the transect. Data was organized and examined to investigate choice
hydrological and hydrogeological properties of the area: baseflow drainage of the Little
River after a rain event; lag time comparison of the transect and Little River; and to
produce flownets of hydraulic conductivity of the transect using USGS groundflow
modeling software. Following significant precipitation events, river stage responds with
rapid rises in level followed by a slower decline to baseflow levels. In contrast,
groundwater has a slightly longer lag-time and water levels remain high for longer
duration, compared to stage. After a precipitation event of 45.77mm over 22hrs, head
exhibits a lag-time almost double that of stage, and rises 2.34x10-3m/hr faster than head
However, both reach maximum levels after approximately 60hrs, suggesting groundwater
has a longer holding capacity in response to an event. Preliminary hydraulic conductivity
studies suggest the majority of the groundwater is flowing through an extremely porous
sand layer, which is sandwiched between less conducive clayey-silt on top, and an
underlying till. Average hydraulic conductivity of the sand layer, based on slug tests and
the Hvorslev method is 3.9x10-4cm/s-1.
Molecular dynamic simulations of water-quartz interactions on quartz surfaces
Robert Doran
Advisor: Dr. Jeffrey A. Greathouse
The objectives of this project are to explore the interactions involved in a
quartz/water interface and the types of uranium surface complexes that form at this
interface. The formation of complexes on inorganic surfaces as thin layers has
applications in the field of synthetic bone material growth on medical implants1. One
kind of interaction is the adhesion of complexes onto inorganic surfaces. These
interactions have similarities with the complexes formed by uranyl ions, UO2
2+. Nuclear
waste management is currently being debated at the Yucca Mountain site. One issue
concerns the interactions between the radioactive uranyl ions and the surrounding
inorganic materials of the mountain. Molecular Dynamic simulations are to be run to
examine the possible interactions at the quartz/water surfaces. DL_POLY is the software
that will be used to run each simulation. A flexible model for quartz2 and the flexible
SPC model for water3 are to be used in the simulations. The 001 and 101 surfaces of
quartz are being examined.
Alphabetical listing of student presenters:
NAME Poster number or oral time
Andrews, Arthur …………………………………… 33
Atkinson, Travis ……………………………………. 13
Benard, Matthew ……………………………………. 16
Buckingham, Lucas ……………………………….…… 37
Callanan, Christine ……………………………………. Oral 3:00-3:15
Christensen, Adam ……………………………………. 2
Cipriano, Scott ……………………………………. 26
Doran, Robert ……………………………………. 42
Earl, Josh ……………………………………. 36
Fallesen, Todd ……………………………………. Oral 3:15-3:30
Fix, Amanda ……………………………………. 31
Goodnow, Sara ……………………………………. 6
Havlicek, Lindsay ……………………………………. 22
Hayes, Brendan Michael ………………………………… 40
Hochstatter, Kelsey ……………………………………. 19
Hubbard, Ian ……………………………………. 38
Hunt, Emily ……………………………………. Oral 2:00-2:15
Kean, William (Liam) ……………………………………. Oral 2:15-2:30
Kolling, Jess ……………………………………. 31
Kostun, Alexis ……………………………………. 24
Krug, J. ……………………………………. 39
Lampreda, Sandy ……………………………………. 25
Lawless, Ryan ……………………………………. 31
Leitch, Amanda ……………………………………. 12
Lennon, Brendan ……………………………………. 41
Livingstone, Katie ……………………………………. 27
Manganini, Kristen ……………………………………. Oral 3:00-3:15
Michaud, Camille ……………………………………. 21
32
Miner, Stephanie ……………………………………. 30
Murray, Stephanie ……………………………………. 23, 31
Mutoru, Jane ……………………………………. 14
Ndungo, Esther ……………………………………. 34
Nortz, Angela ……………………………………. 5
Onyan, Josh ……………………………………. 17
Ouellette, Jeremy ……………………………………. 28
Parker, Kimberly ……………………………………. Oral 3:00-3:15
Post, Sarah ……………………………………. Oral 3:30-3:45, 29
Puchalski, Diana ……………………………………. 7
Putney, Emily ……………………………………. 10
Redman, Jonathan ……………………………………. 35
Roppolo, Megan ……………………………………. 11
Saltonstall, Courtney ……………………………………. 3, 39
Scott, Tommy ……………………………………. 8
StellaLevinsohn, Hannah …………………………….. 9
Stevens, Christopher …………………………………….. 20
Tapply, Adam …………………………………….. Oral 3:00-3:15, 15
Thompson, Matthew …………………………………….. 32
Tolczer, Bryan …………………………………….. 18
Voegeli, S. …………………………………….. 39
Wall, Christopher …………………………………….. Oral 3:00-3:15
Webb, Alexis …………………………………….. Oral 3:00-3:15
Webster, Sarah …………………………………….. 1
Wheeler, Courtney …………………………………….. 4
Wolfe, Barat …………………………………….. Oral 2:30-2:45
Woodward, E. …………………………………….. 39
Zugermayr, Michelle …………………………………….. 23, 31